compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

runtime

The following is a list of runtime dependencies for this project. These dependencies are required to run the application:

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

provided

The following is a list of provided dependencies for this project. These dependencies are required to compile the application, but should be provided by default when using the library:

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

Dependency Tree

• uk.ac.cisban:saint:war:1.0

  Saint: Annotation of Computational Biological Models

  Description: The creation of accurate quantitative Systems Biology Markup Language (SBML) models is a time-intensive manual process. Modellers need to know and understand both the systems they are modelling and the intricacies of SBML. However, the amount of relevant data for even a relatively small and well-scoped model is overwhelming. Saint, an automated SBML annotation integration environment (for an example installation, see http://www.cisban.ac.uk/saint), aims to aid the modeller and reduce development time by providing extra information about any given SBML model in an easy-to-use interface. Saint accepts SBML-formatted files and integrates information from multiple databases automatically. Any new information that the user agrees with is then automatically added to the SBML model. URL: http://saint-annotate.sourceforge.net Project License: GNU Lesser General Public License

  • org.sbml:libsbmlj:jar:5.0.0 (compile)

    Unnamed - org.sbml:libsbmlj:jar:5.0.0
    Description: POM was created from install:install-file Project License: No project license is defined for this project.

  • cellml_api:cellml_api:jar:1.9 (compile)

    Unnamed - cellml_api:cellml_api:jar:1.9
    Description: POM was created from install:install-file Project License: No project license is defined for this project.

  • uk.ac.ebi.miriam:miriam-lib:jar:1.1.2 (compile)

    Miriam Library
    Description: There is currently no description associated with this project. URL: http://www.ebi.ac.uk/miriam/ Project License: No project license is defined for this project.

    • axis:axis:jar:1.4 (compile)

      Axis Web Services
      Description: An implementation of the SOAP ("Simple Object Access Protocol") submission to W3C. URL: http://ws.apache.org/axis Project License: The Apache Software License, Version 2.0

      • org.apache.axis:axis-jaxrpc:jar:1.4 (compile)

        Unnamed - org.apache.axis:axis-jaxrpc:jar:1.4
        Description: POM was created from deploy:deploy-file Project License: No project license is defined for this project.

      • org.apache.axis:axis-saaj:jar:1.4 (compile)

        Unnamed - org.apache.axis:axis-saaj:jar:1.4
        Description: POM was created from deploy:deploy-file Project License: No project license is defined for this project.

      • axis:axis-wsdl4j:jar:1.5.1 (runtime)

        Unnamed - axis:axis-wsdl4j:jar:1.5.1
        Description: There is currently no description associated with this project. Project License: No project license is defined for this project.

    • log4j:log4j:jar:1.2.15 (compile)

      Apache Log4j
      Description: Apache Log4j 1.2 URL: http://logging.apache.org:80/log4j/1.2/ Project License: The Apache Software License, Version 2.0

      • javax.mail:mail:jar:1.4 (compile)

        JavaMail API
        Description: The JavaMail API provides a platform-independent and protocol-independent framework to build mail and messaging applications. URL: https://glassfish.dev.java.net/javaee5/mail/ Project License: Common Development and Distribution License (CDDL) v1.0

      • javax.jms:jms:jar:1.1 (compile)

        Java Message Service

        Description: The Java Message Service (JMS) API is a messaging standard that allows application components based on the Java 2 Platform, Enterprise Edition (J2EE) to create, send, receive, and read messages. It enables distributed communication that is loosely coupled, reliable, and asynchronous. URL: http://java.sun.com/products/jms Project License: No project license is defined for this project.

      • com.sun.jdmk:jmxtools:jar:1.2.1 (compile)

        Unnamed - com.sun.jdmk:jmxtools:jar:1.2.1
        Description: There is currently no description associated with this project. Project License: No project license is defined for this project.

      • com.sun.jmx:jmxri:jar:1.2.1 (compile)

        Unnamed - com.sun.jmx:jmxri:jar:1.2.1
        Description: There is currently no description associated with this project. Project License: No project license is defined for this project.

    • javax.activation:activation:jar:1.1 (compile)

      JavaBeans Activation Framework (JAF)

      Description: JavaBeans Activation Framework (JAF) is a standard extension to the Java platform that lets you take advantage of standard services to: determine the type of an arbitrary piece of data; encapsulate access to it; discover the operations available on it; and instantiate the appropriate bean to perform the operation(s). URL: http://java.sun.com/products/javabeans/jaf/index.jsp Project License: Common Development and Distribution License (CDDL) v1.0

    • javax.mail:mail:jar:1.4 (compile)

      JavaMail API
      Description: The JavaMail API provides a platform-independent and protocol-independent framework to build mail and messaging applications. URL: https://glassfish.dev.java.net/javaee5/mail/ Project License: Common Development and Distribution License (CDDL) v1.0

      • javax.activation:activation:jar:1.1 (compile)

        JavaBeans Activation Framework (JAF)

        Description: JavaBeans Activation Framework (JAF) is a standard extension to the Java platform that lets you take advantage of standard services to: determine the type of an arbitrary piece of data; encapsulate access to it; discover the operations available on it; and instantiate the appropriate bean to perform the operation(s). URL: http://java.sun.com/products/javabeans/jaf/index.jsp Project License: Common Development and Distribution License (CDDL) v1.0

  • commons-discovery:commons-discovery:jar:0.5 (compile)

    Commons Discovery
    Description: The Apache Commons Discovery component is about discovering, or finding, implementations for pluggable interfaces. URL: http://commons.apache.org/discovery/ Project License: The Apache Software License, Version 2.0

    • commons-logging:commons-logging:jar:1.1.1 (compile)

      Commons Logging
      Description: Commons Logging is a thin adapter allowing configurable bridging to other, well known logging systems. URL: http://commons.apache.org/logging Project License: The Apache Software License, Version 2.0

  • axis:axis-wsdl4j:jar:1.5.1 (compile)

    Unnamed - axis:axis-wsdl4j:jar:1.5.1
    Description: There is currently no description associated with this project. Project License: No project license is defined for this project.

  • org.apache.axis:axis:jar:1.4 (compile)

    Unnamed - org.apache.axis:axis:jar:1.4
    Description: POM was created from deploy:deploy-file Project License: No project license is defined for this project.

  • org.apache.axis:axis-jaxrpc:jar:1.4 (compile)

    Unnamed - org.apache.axis:axis-jaxrpc:jar:1.4
    Description: POM was created from deploy:deploy-file Project License: No project license is defined for this project.

  • commons-fileupload:commons-fileupload:jar:1.2.1 (compile)

    Commons FileUpload
    Description: The FileUpload component provides a simple yet flexible means of adding support for multipart file upload functionality to servlets and web applications. URL: http://commons.apache.org/fileupload/ Project License: The Apache Software License, Version 2.0

  • uk.ac.ebi.uniprot.kraken:uniprotjapi:jar:2011.06 (compile)

    Unnamed - uk.ac.ebi.uniprot.kraken:uniprotjapi:jar:2011.06
    Description: There is currently no description associated with this project. Project License: No project license is defined for this project.

    • org.springframework:spring-beans:jar:2.0.5 (compile)

      Spring Framework: Beans
      Description: Spring Framework: Beans URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

      • org.springframework:spring-core:jar:2.0.5 (compile)

        Spring Framework: Core
        Description: Spring Framework: Core URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

    • org.springframework:spring-core:jar:2.0.5 (compile)

      Spring Framework: Core
      Description: Spring Framework: Core URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

    • org.springframework:spring-remoting:jar:2.0.5 (compile)

      Spring Framework: Remoting
      Description: Spring Framework: Remoting URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

      • aopalliance:aopalliance:jar:1.0 (compile)

        AOP alliance
        Description: AOP Alliance URL: http://aopalliance.sourceforge.net Project License: Public Domain

      • org.springframework:spring-aop:jar:2.0.5 (compile)

        Spring Framework: AOP
        Description: Spring Framework: AOP URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

      • org.springframework:spring-beans:jar:2.0.5 (compile)

        Spring Framework: Beans
        Description: Spring Framework: Beans URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

      • org.springframework:spring-context:jar:2.0.5 (compile)

        Spring Framework: Context
        Description: Spring Framework: Context URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

        • aopalliance:aopalliance:jar:1.0 (compile)

          AOP alliance
          Description: AOP Alliance URL: http://aopalliance.sourceforge.net Project License: Public Domain

        • org.springframework:spring-beans:jar:2.0.5 (compile)

          Spring Framework: Beans
          Description: Spring Framework: Beans URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

        • org.springframework:spring-core:jar:2.0.5 (compile)

          Spring Framework: Core
          Description: Spring Framework: Core URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

      • org.springframework:spring-core:jar:2.0.5 (compile)

        Spring Framework: Core
        Description: Spring Framework: Core URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

      • org.springframework:spring-web:jar:2.0.5 (compile)

        Spring Framework: Web
        Description: Spring Framework: Web URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

        • org.springframework:spring-beans:jar:2.0.5 (compile)

          Spring Framework: Beans
          Description: Spring Framework: Beans URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

        • org.springframework:spring-context:jar:2.0.5 (compile)

          Spring Framework: Context
          Description: Spring Framework: Context URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

        • org.springframework:spring-core:jar:2.0.5 (compile)

          Spring Framework: Core
          Description: Spring Framework: Core URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

    • commons-codec:commons-codec:jar:1.3 (compile)

      Codec
      Description: The codec package contains simple encoder and decoders for various formats such as Base64 and Hexadecimal. In addition to these widely used encoders and decoders, the codec package also maintains a collection of phonetic encoding utilities. URL: http://jakarta.apache.org/commons/codec/ Project License: The Apache Software License, Version 2.0

    • org.springframework:spring-aop:jar:2.0.5 (compile)

      Spring Framework: AOP
      Description: Spring Framework: AOP URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

      • aopalliance:aopalliance:jar:1.0 (compile)

        AOP alliance
        Description: AOP Alliance URL: http://aopalliance.sourceforge.net Project License: Public Domain

      • org.springframework:spring-beans:jar:2.0.5 (compile)

        Spring Framework: Beans
        Description: Spring Framework: Beans URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

      • org.springframework:spring-core:jar:2.0.5 (compile)

        Spring Framework: Core
        Description: Spring Framework: Core URL: http://www.springframework.org Project License: The Apache Software License, Version 2.0

    • commons-httpclient:commons-httpclient:jar:3.0.1 (compile)

      HttpClient
      Description: The HttpClient component supports the client-side of RFC 1945 (HTTP/1.0) and RFC 2616 (HTTP/1.1) , several related specifications (RFC 2109 (Cookies) , RFC 2617 (HTTP Authentication) , etc.), and provides a framework by which new request types (methods) or HTTP extensions can be created easily. URL: http://jakarta.apache.org/commons/httpclient/ Project License: Apache License

    • aopalliance:aopalliance:jar:1.0 (compile)

      AOP alliance
      Description: AOP Alliance URL: http://aopalliance.sourceforge.net Project License: Public Domain

  • com.google.gwt:gwt-servlet:jar:2.3.0 (runtime)

    Unnamed - com.google.gwt:gwt-servlet:jar:2.3.0
    Description: Sonatype helps open source projects to set up Maven repositories on https://oss.sonatype.org/ URL: http://code.google.com/webtoolkit/gwt-servlet Project License: Google Web Toolkit Terms

  • com.google.gwt:gwt-user:jar:2.3.0 (provided)

    Unnamed - com.google.gwt:gwt-user:jar:2.3.0
    Description: Sonatype helps open source projects to set up Maven repositories on https://oss.sonatype.org/ URL: http://code.google.com/webtoolkit/gwt-user Project License: Google Web Toolkit Terms

  • junit:junit:jar:4.1 (test)

    Unnamed - junit:junit:jar:4.1
    Description: There is currently no description associated with this project. Project License: No project license is defined for this project.